| SNP | Name | Pav_sc0000308.1_178774W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 5299717 | |
| PAV_r1.0 | Name | Pav_sc0000308.1 |
| Position | 178774 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000308.1_g250.1.mk |
| Annotation | PREDICTED: xylose isomerase | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.814-89A>T | |
| Amino Acid | ||
| PCR | Forward primer | CTGCAGCTTCAAGAAACCGT |
| Reverse primer | ACATGGGACGAGAGCTTGAT | |
| Product size | 310 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |