| SNP | Name | Pav_sc0000299.1_111215Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 19761994 | |
| PAV_r1.0 | Name | Pav_sc0000299.1 |
| Position | 111215 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000299.1_g230.1.mk |
| Annotation | H(+)-transporting atpase plant/fungi plasma membrane type, putative | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.84G>A | |
| Amino Acid | p.Glu28Glu | |
| PCR | Forward primer | TAAAAAGAAAAGGCGGCAGA |
| Reverse primer | GCTTTTGCGTTTTGTGGTCT | |
| Product size | 281 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |