| SNP | Name | Pav_sc0000299.1_110882K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 19761661 | |
| PAV_r1.0 | Name | Pav_sc0000299.1 |
| Position | 110882 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000299.1_g230.1.mk |
| Annotation | H(+)-transporting atpase plant/fungi plasma membrane type, putative | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.184-16C>A | |
| Amino Acid | ||
| PCR | Forward primer | TTCCATCACCCATGACAGAG |
| Reverse primer | TCTGCCGCCTTTTCTTTTTA | |
| Product size | 234 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 77,157 | |
| Exp. fragment size (ALT) | 234 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |