| SNP | Name | Pav_sc0000296.1_86562K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 16641356 | |
| PAV_r1.0 | Name | Pav_sc0000296.1 |
| Position | 86562 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000296.1_g130.1.br |
| Annotation | PREDICTED: indole-3-acetate O-methyltransferase 1-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.528+320C>A | |
| Amino Acid | ||
| PCR | Forward primer | GATGGGCTGCAAATAAGGAA |
| Reverse primer | AATTTTGAAGGGGATGGACC | |
| Product size | 226 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 126,100 | |
| Exp. fragment size (ALT) | 226 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |