| SNP | Name | Pav_sc0000257.1_106349R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 38308174 | |
| PAV_r1.0 | Name | Pav_sc0000257.1 |
| Position | 106349 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000257.1_g180.1.mk |
| Annotation | PREDICTED: histone H3-like centromeric protein HTR12 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.306C>T | |
| Amino Acid | p.Leu102Leu | |
| PCR | Forward primer | CTGGCAAGTTGGATGTCCTT |
| Reverse primer | TGATCAGGAAGCTCCCATTC | |
| Product size | 202 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |