| SNP | Name | Pav_sc0000243.1_65721Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 6794646 | |
| PAV_r1.0 | Name | Pav_sc0000243.1 |
| Position | 65721 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000243.1_g150.1.mk |
| Annotation | PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.658C>T | |
| Amino Acid | p.Arg220Trp | |
| PCR | Forward primer | CCAGGTCAGTGTGTCAATGG |
| Reverse primer | TGGTTATGCATCAGGATGTTG | |
| Product size | 321 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |