| SNP | Name | Pav_sc0000243.1_65589R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 6794514 | |
| PAV_r1.0 | Name | Pav_sc0000243.1 |
| Position | 65589 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000243.1_g150.1.mk |
| Annotation | PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.622-96A>G | |
| Amino Acid | ||
| PCR | Forward primer | GAGCTGGGTAAGGGGGTCTA |
| Reverse primer | TCAAATGCAACACGAGCAAT | |
| Product size | 339 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |