SNP Information
SNP |
Name |
Pav_sc0000220.1_693266Y |
REF |
T |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
21984113 |
PAV_r1.0 |
Name |
Pav_sc0000220.1 |
Position |
693266 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.693266T>C |
Amino Acid |
|
PCR |
Forward primer |
TTGCATGTTCCATGAGCCTA |
Reverse primer |
AGTGAAAAGCAATTGGGATGA |
Product size |
292 |
Enzymes for CAPS |
AluI |
Exp. fragment size (REF) |
238,54 |
Exp. fragment size (ALT) |
146,92,54 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/ALT |
Benitemari |
REF/REF |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |