| SNP | Name | Pav_sc0000212.1_760482Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 16687087 | |
| PAV_r1.0 | Name | Pav_sc0000212.1 |
| Position | 760482 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000212.1_g1430.1.mk |
| Annotation | PREDICTED: probable caffeoyl-CoA O-methyltransferase At4g26220 | |
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-6A>G | |
| Amino Acid | ||
| PCR | Forward primer | CGGTTCACGGGGATATACA |
| Reverse primer | GAGTTGCAATTGTGCTCTGC | |
| Product size | 338 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |