| SNP | Name | Pav_sc0000203.1_33794R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 16738925 | |
| PAV_r1.0 | Name | Pav_sc0000203.1 |
| Position | 33794 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000203.1_g080.1.mk |
| Annotation | PREDICTED: LOW QUALITY PROTEIN: protein IQ-DOMAIN 1 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.1014A>G | |
| Amino Acid | p.Ala338Ala | |
| PCR | Forward primer | CTCAACCGGAAGAGGTGAAA |
| Reverse primer | TGAATCTTGATTGCTGCCAC | |
| Product size | 208 | |
| Enzymes for CAPS | HhaI | |
| Exp. fragment size (REF) | 208 | |
| Exp. fragment size (ALT) | 134,74 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |