| SNP | Name | Pav_sc0000183.1_189713Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 6058167 | |
| PAV_r1.0 | Name | Pav_sc0000183.1 |
| Position | 189713 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000183.1_g470.1.mk |
| Annotation | PREDICTED: aspartate, glycine, lysine and serine-rich protein-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.803+161C>T | |
| Amino Acid | ||
| PCR | Forward primer | CCCCTGACGACTGGTAAGAA |
| Reverse primer | GAAACCCCGAGAGATATTCCA | |
| Product size | 304 | |
| Enzymes for CAPS | HaeIII | |
| Exp. fragment size (REF) | 172,132 | |
| Exp. fragment size (ALT) | 304 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |