| SNP | Name | Pav_sc0000174.1_173313M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 8505850 | |
| PAV_r1.0 | Name | Pav_sc0000174.1 |
| Position | 173313 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000174.1_g270.1.mk |
| Annotation | PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.299C>A | |
| Amino Acid | p.Ser100Tyr | |
| PCR | Forward primer | CGTCTCAGATGCACCTTCAA |
| Reverse primer | ATGAGCAGCACACCAAACAG | |
| Product size | 244 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |