| SNP | Name | Pav_sc0000158.1_8382Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 789308 | |
| PAV_r1.0 | Name | Pav_sc0000158.1 |
| Position | 8382 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000158.1_g020.1.mk |
| Annotation | PREDICTED: putative pentatricopeptide repeat-containing protein At1g16830 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.-560+18C>T | |
| Amino Acid | ||
| PCR | Forward primer | ATCAGCTGCCTTTTTCTGGA |
| Reverse primer | ATCGATCGTCATCCCTTTTG | |
| Product size | 235 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | ALT/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |