| SNP | Name | Pav_sc0000157.1_106793M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 14913341 | |
| PAV_r1.0 | Name | Pav_sc0000157.1 |
| Position | 106793 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000157.1_g180.1.mk |
| Annotation | PREDICTED: pentatricopeptide repeat-containing protein At5g65560-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.746G>T | |
| Amino Acid | p.Arg249Leu | |
| PCR | Forward primer | TTCTGAAAAGCCCAATTGCT |
| Reverse primer | GGTCCAGGAAGCAGAGTTGA | |
| Product size | 344 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |