| SNP | Name | Pav_sc0000148.1_82129Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 4530290 | |
| PAV_r1.0 | Name | Pav_sc0000148.1 |
| Position | 82129 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000148.1_g180.1.mk |
| Annotation | hypothetical protein PRUPE_ppa015501mg | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.669A>G | |
| Amino Acid | p.Ser223Ser | |
| PCR | Forward primer | TGCACTGACAAGTGGGGTAA |
| Reverse primer | ATCAAAGGATTGAGGATGCG | |
| Product size | 285 | |
| Enzymes for CAPS | EcoRV | |
| Exp. fragment size (REF) | 285 | |
| Exp. fragment size (ALT) | 139,146 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |