| SNP | Name | Pav_sc0000146.1_288573Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr8 |
| Position | 19164875 | |
| PAV_r1.0 | Name | Pav_sc0000146.1 |
| Position | 288573 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000146.1_g560.1.mk |
| Annotation | PREDICTED: protein TIME FOR COFFEE isoform X1 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1093+12C>T | |
| Amino Acid | ||
| PCR | Forward primer | GGAAGCTGTGGTTGAGAAGG |
| Reverse primer | AGTGTGGTGGATGATCCCAT | |
| Product size | 301 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |