SNP Information
SNP |
Name |
Pav_sc0000131.1_355843K |
REF |
G |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
30074326 |
PAV_r1.0 |
Name |
Pav_sc0000131.1 |
Position |
355843 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.355843G>T |
Amino Acid |
|
PCR |
Forward primer |
TGAAGCTTTTGAACCCTGCT |
Reverse primer |
GAAGAAGACCAGAACCCGCT |
Product size |
322 |
Enzymes for CAPS |
MboI |
Exp. fragment size (REF) |
78,104,140 |
Exp. fragment size (ALT) |
78,244 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/ALT |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
ALT/ALT |
Nanyo |
REF/REF |
Satonishiki |
REF/ALT |