SNP Information
SNP |
Name |
Pav_sc0000130.1_317097K |
REF |
T |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
20452260 |
PAV_r1.0 |
Name |
Pav_sc0000130.1 |
Position |
317097 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.317097T>G |
Amino Acid |
|
PCR |
Forward primer |
AACACAGCACATTGGTGGAA |
Reverse primer |
TTGACGTGATTATCGACCCA |
Product size |
339 |
Enzymes for CAPS |
AluI |
Exp. fragment size (REF) |
82,80,125,12,40 |
Exp. fragment size (ALT) |
82,80,56,69,12,40 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |