| SNP | Name | Pav_sc0000111.1_3835Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 5348481 | |
| PAV_r1.0 | Name | Pav_sc0000111.1 |
| Position | 3835 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000111.1_g010.1.mk |
| Annotation | PREDICTED: (6-4)DNA photolyase | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.799-181A>G | |
| Amino Acid | ||
| PCR | Forward primer | TAACAGATGCGAAATCTGCG |
| Reverse primer | GTGCATGAGAGAGAGTGCCA | |
| Product size | 227 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |