| SNP | Name | Pav_sc0000107.1_9539R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 7467540 | |
| PAV_r1.0 | Name | Pav_sc0000107.1 |
| Position | 9539 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000107.1_g010.1.mk |
| Annotation | hypothetical protein PRUPE_ppa010761mg | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*465C>T | |
| Amino Acid | ||
| PCR | Forward primer | TAAGCATTCTTGCTGCATGG |
| Reverse primer | CTGGGTCATTTGCCTTTGAT | |
| Product size | 291 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |