SNP Information
SNP |
Name |
Pav_sc0000103.1_568489W |
REF |
A |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr5 |
Position |
16505945 |
PAV_r1.0 |
Name |
Pav_sc0000103.1 |
Position |
568489 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.568489A>T |
Amino Acid |
|
PCR |
Forward primer |
GTGTAGCAGCAGCAGCAGAG |
Reverse primer |
TGACACTCCAACAAAGCCTG |
Product size |
310 |
Enzymes for CAPS |
|
Exp. fragment size (REF) |
|
Exp. fragment size (ALT) |
|
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/REF |
Satonishiki |
REF/REF |