SNP Information
SNP |
Name |
Pav_sc0000100.1_84339K |
REF |
G |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
10775923 |
PAV_r1.0 |
Name |
Pav_sc0000100.1 |
Position |
84339 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.84339G>T |
Amino Acid |
|
PCR |
Forward primer |
GAAAAAGGGGTGATGCTTGA |
Reverse primer |
TGCTGAATTTGTTGTGTTGC |
Product size |
345 |
Enzymes for CAPS |
MboI |
Exp. fragment size (REF) |
226,19,100 |
Exp. fragment size (ALT) |
226,119 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/REF |
Satonishiki |
REF/REF |