| SNP | Name | Pav_sc0000099.1_46828Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 13650611 | |
| PAV_r1.0 | Name | Pav_sc0000099.1 |
| Position | 46828 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000099.1_g100.1.mk |
| Annotation | PREDICTED: putative B3 domain-containing protein At4g03170 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.462+28C>T | |
| Amino Acid | ||
| PCR | Forward primer | GCACGTCTGGCTATTGTTGA |
| Reverse primer | AGCTTCTTTTAAGCCAGCCC | |
| Product size | 270 | |
| Enzymes for CAPS | MspI | |
| Exp. fragment size (REF) | 196,74 | |
| Exp. fragment size (ALT) | 270 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |