| SNP | Name | Pav_sc0000096.1_352659M |
|---|---|---|
| REF | A | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 3847219 | |
| PAV_r1.0 | Name | Pav_sc0000096.1 |
| Position | 352659 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000096.1_g580.1.mk |
| Annotation | PREDICTED: uncharacterized protein At2g41620-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.103-66A>C | |
| Amino Acid | ||
| PCR | Forward primer | TTCCGCTGACTGTAATGCAC |
| Reverse primer | TCGCCTTGAGTTTCTTCGAT | |
| Product size | 344 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 307,37 | |
| Exp. fragment size (ALT) | 229,78,37 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |