SNP Information
SNP |
Name |
Pav_sc0000087.1_265310K |
REF |
T |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr6 |
Position |
5073795 |
PAV_r1.0 |
Name |
Pav_sc0000087.1 |
Position |
265310 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.265310T>G |
Amino Acid |
|
PCR |
Forward primer |
CCGGAGGTGAAAACTGAAAA |
Reverse primer |
AATGGTGTCTCCCTCCCTCT |
Product size |
230 |
Enzymes for CAPS |
SalI |
Exp. fragment size (REF) |
230 |
Exp. fragment size (ALT) |
131,99 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
-/- |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
-/- |
Satonishiki |
REF/ALT |