SNP Information
SNP |
Name |
Pav_sc0000069.1_28735R |
REF |
A |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
30468903 |
PAV_r1.0 |
Name |
Pav_sc0000069.1 |
Position |
28735 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.28735A>G |
Amino Acid |
|
PCR |
Forward primer |
CACGTGAACCGCAATACATC |
Reverse primer |
TTTCACCATTCCTTGATGGC |
Product size |
217 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
126,12,79 |
Exp. fragment size (ALT) |
138,79 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
-/- |
Benitemari |
REF/ALT |
Beniyutaka |
ALT/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |