SNP Information
SNP |
Name |
Pav_sc0000042.1_42960K |
REF |
G |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr5 |
Position |
11453714 |
PAV_r1.0 |
Name |
Pav_sc0000042.1 |
Position |
42960 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.42960G>T |
Amino Acid |
|
PCR |
Forward primer |
AAAAAGCGTGGAACTCCCTT |
Reverse primer |
TCACTTTGAATTCCCCGTTC |
Product size |
289 |
Enzymes for CAPS |
|
Exp. fragment size (REF) |
|
Exp. fragment size (ALT) |
|
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
ALT/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
ALT/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |