| SNP | Name | Pav_sc0000037.1_84932K |
|---|---|---|
| REF | T | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 3491975 | |
| PAV_r1.0 | Name | Pav_sc0000037.1 |
| Position | 84932 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000037.1_g160.1.mk |
| Annotation | PREDICTED: protein CHUP1, chloroplastic | |
| snpEff | Effect | splice_region_variant&intron_variant |
| Impact | LOW | |
| Codon | c.1698+8T>G | |
| Amino Acid | ||
| PCR | Forward primer | ATAGATCAAGCTGGCATCCG |
| Reverse primer | CTCATCGTTTCTGCATCGAA | |
| Product size | 260 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |