| SNP | Name | Pav_sc0000030.1_48451Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 36958169 | |
| PAV_r1.0 | Name | Pav_sc0000030.1 |
| Position | 48451 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000030.1_g080.1.mk |
| Annotation | hypothetical protein PRUPE_ppa001869mg | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*286T>C | |
| Amino Acid | ||
| PCR | Forward primer | GGCAATTTGGACAAGAGGAA |
| Reverse primer | GGACCTAACCAGACAGCCAA | |
| Product size | 313 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 201,23,89 | |
| Exp. fragment size (ALT) | 201,23,9,80 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |