| SNP | Name | Pav_sc0000017.1_70939R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 11693034 | |
| PAV_r1.0 | Name | Pav_sc0000017.1 |
| Position | 70939 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000017.1_g140.1.mk |
| Annotation | PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.401T>C | |
| Amino Acid | p.Leu134Ser | |
| PCR | Forward primer | AAAATATCCATCCAAGGGGG |
| Reverse primer | CTTGGTGCATTGAAAACCCT | |
| Product size | 254 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |