| SNP | Name | Pav_sc0000012.1_172977R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 10866643 | |
| PAV_r1.0 | Name | Pav_sc0000012.1 |
| Position | 172977 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000012.1_g360.1.mk |
| Annotation | hypothetical protein PRUPE_ppa000047mg | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.1179G>A | |
| Amino Acid | p.Ala393Ala | |
| PCR | Forward primer | CGCTGCTATTCTGATCTATCCA |
| Reverse primer | GCAACATTTCAGAAGGCACA | |
| Product size | 282 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |