| SNP | Name | Pav_sc0000006.1_131949Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 3396516 | |
| PAV_r1.0 | Name | Pav_sc0000006.1 |
| Position | 131949 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000006.1_g320.1.mk |
| Annotation | PREDICTED: protein kinase and PP2C-like domain-containing protein | |
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-66T>C | |
| Amino Acid | ||
| PCR | Forward primer | GTCGCGGGTTGAATTTGTAG |
| Reverse primer | TGGAAGATGGAGAGGAATGG | |
| Product size | 243 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |